BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021C11SP1|AL427742
(288 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig168 322 2e-88
>3x_Contig168
Length = 941
Score = 322 bits (161), Expect = 2e-88
Identities = 161/161 (100%)
Strand = Plus / Minus
Query: 18 agatctttaaataaaacttatatttgagattatttaaatgaattaagtaataaaggtgta 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 agatctttaaataaaacttatatttgagattatttaaatgaattaagtaataaaggtgta 102
Query: 78 aaattacaacatttaaataatattaattcttgatcatctcaaatttataaatttaataaa 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 aaattacaacatttaaataatattaattcttgatcatctcaaatttataaatttaataaa 42
Query: 138 actgaagaaattaataatactatttatgatagattagtaac 178
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 actgaagaaattaataatactatttatgatagattagtaac 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3567
Number of Sequences: 1807
Number of extensions: 3567
Number of successful extensions: 117
Number of sequences better than 1.0e-20: 1
length of query: 288
length of database: 10,358,551
effective HSP length: 15
effective length of query: 273
effective length of database: 10,331,446
effective search space: 2820484758
effective search space used: 2820484758
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 49 (98.5 bits)